Publicaciones (96) Publicaciones de MICHAEL HACKENBERG

2024

  1. Assessing the complementary information from an increased number of biologically relevant features in liquid biopsy-derived RNA-Seq data

    Heliyon, Vol. 10, Núm. 6

2023

  1. ALL-tRNAseq enables robust tRNA profiling in tissue samples

    Genes & development, Vol. 37, Núm. 5-6, pp. 243-257

  2. Combinatorial Blood Platelets-Derived circRNA and mRNA Signature for Early-Stage Lung Cancer Detection

    International Journal of Molecular Sciences, Vol. 24, Núm. 5

  3. Comprehensive, integrative genomic analysis of microRNA expression profiles in different tissues of two wheat cultivars with different traits

    Functional and Integrative Genomics, Vol. 23, Núm. 1

  4. Genome-Wide Analysis of microRNA Expression Profile in Roots and Leaves of Three Wheat Cultivars under Water and Drought Conditions

    Biomolecules, Vol. 13, Núm. 3

  5. HSV-1 miRNAs are post-transcriptionally edited in latently infected human ganglia

    Journal of Virology, Vol. 97, Núm. 10

  6. Interferon-Alpha Decreases Cancer Stem Cell Properties and Modulates Exosomes in Malignant Melanoma

    Cancers, Vol. 15, Núm. 14

  7. IsoSeek for unbiased and UMI-informed sequencing of miRNAs from low input samples at single-nucleotide resolution

    STAR Protocols, Vol. 4, Núm. 4

  8. NORMSEQ: A tool for evaluation, selection and visualization of RNA-Seq normalization methods

    Nucleic Acids Research, Vol. 51, Núm. W1, pp. W372-W378

  9. Reassessment of miRNA variant (isomiRs) composition by small RNA sequencing

    Cell Reports Methods, Vol. 3, Núm. 5

  10. isomiRdb: microRNA expression at isoform resolution

    Nucleic Acids Research, Vol. 51, Núm. 1 D, pp. D179-D185

  11. sRNAtoolbox: Dockerized Analysis of Small RNA Sequencing Data in Model and Non-model Species

    Methods in molecular biology (Clifton, N.J.), Vol. 2630, pp. 179-213

2022

  1. Bioinformatic Analysis of Ixodes ricinus Long Non-Coding RNAs Predicts Their Binding Ability of Host miRNAs

    International Journal of Molecular Sciences, Vol. 23, Núm. 17

  2. Decoding Gene Expression Signatures Underlying Vegetative to Inflorescence Meristem Transition in the Common Bean

    International Journal of Molecular Sciences, Vol. 23, Núm. 23

  3. Digital multiplexed analysis of circular RNAs in FFPE and fresh non-small cell lung cancer specimens

    Molecular Oncology, Vol. 16, Núm. 12, pp. 2367-2383

  4. Functional Enrichment Analysis of Regulatory Elements

    Biomedicines, Vol. 10, Núm. 3

  5. Functional characterization of the tomato HAIRPLUS gene reveals the implication of the epigenome in the control of glandular trichome formation

    Horticulture Research, Vol. 9

  6. MirGeneDB 2.1: toward a complete sampling of all major animal phyla

    Nucleic acids research, Vol. 50, Núm. D1, pp. D204-D210

  7. Multiplex Analysis of CircRNAs from Plasma Extracellular Vesicle-Enriched Samples for the Detection of Early-Stage Non-Small Cell Lung Cancer

    Pharmaceutics, Vol. 14, Núm. 10

  8. Quantitative proteomics analysis reveals core and variable tick salivary proteins at the tick-vertebrate host interface

    Molecular Ecology, Vol. 31, Núm. 15, pp. 4162-4175