Publicaciones en colaboración con investigadores/as de Universidad Complutense de Madrid (15)

2014

  1. Space: An algorithm to predict and quantify alternatively spliced isoforms using microarrays

    Bioinformatics: The Impact of Accurate Quantification on Proteomic and Genetic Analysis and Research (Apple Academic Press), pp. 105-144

2011

  1. Finding closed frequent item sets by intersecting transactions

    ACM International Conference Proceeding Series

2010

  1. MARQ: An online tool to mine GEO for experiments with similar or opposite gene expression signatures

    Nucleic Acids Research, Vol. 38, Núm. SUPPL. 2

2009

  1. GeneCodis: Interpreting gene lists through enrichment analysis and integration of diverse biological information

    Nucleic Acids Research, Vol. 37, Núm. SUPPL. 2

  2. SENT: Semantic features in text

    Nucleic Acids Research, Vol. 37, Núm. SUPPL. 2

2008

  1. ChIPCodis: Mining complex regulatory systems in yeast by concurrent enrichment analysis of chip-on-chip data

    Bioinformatics, Vol. 24, Núm. 9, pp. 1208-1209

  2. SPACE: An algorithm to predict and quantify alternatively spliced isoforms using microarrays

    Genome Biology, Vol. 9, Núm. 2

  3. bioNMF: a web-based tool for nonnegative matrix factorization in biology.

    Nucleic acids research, Vol. 36, Núm. Web Server issue

2007

  1. GENECODIS: A web-based tool for finding significant concurrent annotations in gene lists

    Genome Biology, Vol. 8, Núm. 1

2006

  1. A literature-based similarity metric for biological processes

    BMC Bioinformatics, Vol. 7

  2. Biclustering of gene expression data by non-smooth non-negative matrix factorization

    BMC Bioinformatics, Vol. 7

  3. BioNMF: A versatile tool for non-negative matrix factorization in biology

    BMC Bioinformatics, Vol. 7

  4. Discovering semantic features in the literature: A foundation for building functional associations

    BMC Bioinformatics, Vol. 7

  5. Integrated analysis of gene expression by association rules discovery

    BMC Bioinformatics, Vol. 7

2005

  1. Two-way clustering of gene expression profiles by sparse matrix factorization

    2005 IEEE Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts