Publications (27) ERNESTO LUIS APARICIO PUERTA publications

2024

  1. Unlocking the effective alliance of β-lapachone and hydroxytyrosol against triple-negative breast cancer cells

    Biomedicine and Pharmacotherapy, Vol. 174

2023

  1. ALL-tRNAseq enables robust tRNA profiling in tissue samples

    Genes & development, Vol. 37, Núm. 5-6, pp. 243-257

  2. Ageing-associated small RNA cargo of extracellular vesicles

    RNA Biology, Vol. 20, Núm. 1, pp. 482-494

  3. Comprehensive, integrative genomic analysis of microRNA expression profiles in different tissues of two wheat cultivars with different traits

    Functional and Integrative Genomics, Vol. 23, Núm. 1

  4. Genome-Wide Analysis of microRNA Expression Profile in Roots and Leaves of Three Wheat Cultivars under Water and Drought Conditions

    Biomolecules, Vol. 13, Núm. 3

  5. IsoSeek for unbiased and UMI-informed sequencing of miRNAs from low input samples at single-nucleotide resolution

    STAR Protocols, Vol. 4, Núm. 4

  6. Reassessment of miRNA variant (isomiRs) composition by small RNA sequencing

    Cell Reports Methods, Vol. 3, Núm. 5

  7. isomiRdb: microRNA expression at isoform resolution

    Nucleic Acids Research, Vol. 51, Núm. 1 D, pp. D179-D185

  8. miEAA 2023: updates, new functional microRNA sets and improved enrichment visualizations

    Nucleic acids research, Vol. 51, Núm. W1, pp. W319-W325

  9. sRNAtoolbox: Dockerized Analysis of Small RNA Sequencing Data in Model and Non-model Species

    Methods in molecular biology (Clifton, N.J.), Vol. 2630, pp. 179-213

2022

  1. Functional Enrichment Analysis of Regulatory Elements

    Biomedicines, Vol. 10, Núm. 3

  2. MicroRNA-4732-3p Is Dysregulated in Breast Cancer Patients with Cardiotoxicity, and Its Therapeutic Delivery Protects the Heart from Doxorubicin-Induced Oxidative Stress in Rats

    Antioxidants, Vol. 11, Núm. 10

  3. MirGeneDB 2.1: toward a complete sampling of all major animal phyla

    Nucleic acids research, Vol. 50, Núm. D1, pp. D204-D210

  4. Quantitative proteomics analysis reveals core and variable tick salivary proteins at the tick-vertebrate host interface

    Molecular Ecology, Vol. 31, Núm. 15, pp. 4162-4175

  5. Transcriptomic analysis of the tick midgut and salivary gland responses upon repeated blood-feeding on a vertebrate host

    Frontiers in Cellular and Infection Microbiology, Vol. 12

  6. sRNAbench and sRNAtoolbox 2022 update: accurate miRNA and sncRNA profiling for model and non-model organisms

    Nucleic Acids Research, Vol. 50, Núm. W1, pp. W710-W717

2021

  1. Extracellular vesicle miRNA predict FDG-PET status in patients with classical Hodgkin Lymphoma

    Journal of Extracellular Vesicles, Vol. 10, Núm. 9

  2. In Silico Analysis of Micro-RNA Sequencing Data

    Methods in Molecular Biology (Humana Press Inc.), pp. 231-251

  3. Validation of human microRNA target pathways enables evaluation of target prediction tools

    Nucleic Acids Research, Vol. 49, Núm. 1, pp. 127-144

  4. geno5mC: A Database to Explore the Association between Genetic Variation (SNPs) and CpG Methylation in the Human Genome

    Journal of Molecular Biology, Vol. 433, Núm. 11