Publikationen in Zusammenarbeit mit Forschern von German Cancer Research Center (19)

2023

  1. Pistachio genomes provide insights into nut tree domestication and ZW sex chromosome evolution

    Plant Communications, Vol. 4, Núm. 3

2017

  1. Semantics and efficient simulation algorithms of an expressive multilevel modeling language

    ACM Transactions on Modeling and Computer Simulation, Vol. 27, Núm. 2

2014

  1. Multi-level modeling and simulation of cell biological systems with ML-Rules - A tutorial

    Proceedings - Winter Simulation Conference

2013

  1. From standardized modeling formats to modeling languages and back - An exploration based on SBML and ML-Rules

    Proceedings of the 2013 Winter Simulation Conference - Simulation: Making Decisions in a Complex World, WSC 2013

2010

  1. PromoterSweep: A tool for identification of transcription factor binding sites

    Theoretical Chemistry Accounts, Vol. 125, Núm. 3-6, pp. 583-591

  2. The transcriptome of the colonial marine hydroid Hydractinia echinata

    FEBS Journal, Vol. 277, Núm. 1, pp. 197-209

  3. TissueDistributionDBs: A repository of organism-specific tissue-distribution profiles

    Theoretical Chemistry Accounts, Vol. 125, Núm. 3-6, pp. 651-658

2009

  1. Profile analysis and prediction of tissue-specific CpG island methylation classes

    BMC Bioinformatics, Vol. 10

2007

  1. Mining and predicting CpG islands

    IEEE International Conference on Fuzzy Systems

  2. Mining and predicting CpG islands

    2007 IEEE INTERNATIONAL CONFERENCE ON FUZZY SYSTEMS, VOLS 1-4

  3. ProtSweep, 2Dsweep and DomainSweep: Protein analysis suite at DKFZ

    Nucleic Acids Research, Vol. 35, Núm. SUPPL.2

2006

  1. A molecular classification of multiple myeloma (MM) based on gene expression profiling and fluorescence in situ hybridisation as independent prognostic factor for event free survival (EFS)

    EJC SUPPLEMENTS

  2. CAFTAN: A tool for fast mapping, and quality assessment of cDNAs

    BMC Bioinformatics, Vol. 7

  3. GOPET: A tool for automated predictions of gene ontology terms

    BMC Bioinformatics, Vol. 7

  4. Lentiviral vector integration sites in human NOD/SCID repopulating cells

    Journal of Gene Medicine, Vol. 8, Núm. 10, pp. 1197-1207

  5. Retroviral vector insertions in T-lymphocytes used for suicide gene therapy occur in gene groups with specific molecular functions

    Bone Marrow Transplantation, Vol. 38, Núm. 3, pp. 229-235

  6. The LIFEdb database in 2006.

    Nucleic acids research, Vol. 34, Núm. Database issue

2004

  1. High-throughput protein analysis integrating bioinformatics and experimental assays

    Nucleic Acids Research, Vol. 32, Núm. 2, pp. 742-748

2003

  1. cDNA2Genome: A tool for mapping and annotating cDNAs

    BMC Bioinformatics, Vol. 4